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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015859532.1_cds_XP_016514348.1_26809
CDS Infomation

[gene=LOC107831133] [db_xref=GeneID:107831133] [protein=lysine--tRNA ligase, cytoplasmic-like] [protein_id=XP_016514348.1] [location=complement(join(143329..143378,144393..144447,144859..145002,145108..145176,145265..145408,146096..146252,146323..146419,146531..146813,146915..147040,147152..147214,147283..147392,147655..147740,149074..149167,149243..149408,149549..149662))] [gbkey=CDS]
Sequence

ATGGACACACCACAAAACGCTGAAAGCTCTCAGTATGAGAAGCAGAAGCAGAATGCTGAG
AAGCAGAAGCAGAAGTATTCTGTAGCTGAAGATGACGAGGGCATGGATCCGAAGCAATAC
TATGAAAATATGCTGAAAGTAGTTGCAGCTGAGAAGGCAAATGGTCGGAATCCTTACCCA
CACAAGTTCCATCTGACTTTGTACGTCCCTGAATATGTGAAGAAATATGGAGTTTTAGGG
ACTCCACAATTTATTGGGGATCAACTCGAGGCCTTGGCGGGAAGGATATTGAACAAACGT
GCGTCTTCTGCAATGCTGTTTTGCTATGATTTACAGGGTGAAGGTGCCAACGTCCTAGTT
ATGGCACATATGAGTAGCTCTGAGTTGGTTGCAGAGGAATTTACTAAATTTCATTCTGGT
TTGAAGCGTGGAGATGTTGTTGGAGTTGTTGGGTTTCCAGGAAACAGAAAAAGGGGAGGG
GTGACTATTTATCCCAAATCATTTGTAGTGTTGTCTCATTGTCTTCGTTTGTTGCCACGG
CAGAAAGATACCCCGATGGATACAACTAAGAAAACTGAAGCACGGGTCCTGGAAAGTGGC
CAAAATCCAGAAACATATGCGTTAAAAGATCAGGAACCACGACATAGACAGTGTTATTTG
GATTTCATGCTAAACTTAGAGGTTCGGCGTATATTTAAGACCCGTGCAAAGATCATAACT
CATATCCGAAGTTTTCTTGATAGTCTAGGCTTCTTAGAGGTAGAGACCCCCATGATGCAC
ATAATTGCTGGTGGAGCAGCTGCACGTCCATTTGTGACCCACCACAATGAATTGAATATG
AGGCTTTTCATGCGTATTGCTCCTGAACTATATCTTAAACAGCTAGTTGTTGGTGGATTT
GATCGTGTCTATGAGATTGGGAAACAATTCAGAAATGAGGGGATTGACCTGACGCACAAT
CCTGAATTCACCACTTGCGAGTTTTATATGGCATATGCGGATTACAATGACTTGATGGAT
TTAACTGAAAAAATGTTAAGTGGGATGGTGAAGGAACTTACAGGTAGCTATATAATCAAG
TATCACGCAAAGGGGCTGGAGAGTGACCCAGTTGAGATAGATTTAACTCCTCCCTTCAGA
AGGATTGATATGGTAGAGGAATTGGAGAAGGTCGCAAACTTGAATATACCCAAGGATCTC
TCAAGTGATGAAGCTAACAAATATCTCATAGATGCTTGTGCAAAGTTTGAGATCGAATGT
CCTCCACCTCAAACAACAGCTAGATTACTTGATAAACTTGTGGGGCACTTTCTGGAGGAG
ACATGTGTTAACCCTACTTTTATTCTCAACCATCCCGAGATAATGAGTCCTTTGGCAAAG
TGGCACAGATCGAAACCAGGCCTGACAGAACGTTTTGAATTGCTTATAAACAAGCATGAA
CTTTGCAGTGCATACACTGAATTGAATGACCCTGTTGTCCAACGCCAGCGTTTTGCTGAT
CAACTCAAGGACCGTCACTCAGGTGATGGTGAAGCTATGGTACTGGATGAGAACTTTTGT
ACGGCTCTTGAGTATGGATTACCTCCTACTGGTGGTTGGGGATTGGGTATTGACCGACTT
GTAATGTTGTTGACAGATTCACAAAACATCAAGGAAGTTCTACTCCTTCCAACCATGAAA
CCACAGGATGAGCCACCTTCCAAAGAAGATGTGGAAAAGCAGATGTCACACCTCAAGATG
AATGAAGAACATATATGA

Peptide Sequence

PEP ID

XP_016514348.1
PEP Infomation

PREDICTED: lysine--tRNA ligase, cytoplasmic-like [Nicotiana tabacum]
Sequence

MDTPQNAESSQYEKQKQNAEKQKQKYSVAEDDEGMDPKQYYENMLKVVAAEKANGRNPYP
HKFHLTLYVPEYVKKYGVLGTPQFIGDQLEALAGRILNKRASSAMLFCYDLQGEGANVLV
MAHMSSSELVAEEFTKFHSGLKRGDVVGVVGFPGNRKRGGVTIYPKSFVVLSHCLRLLPR
QKDTPMDTTKKTEARVLESGQNPETYALKDQEPRHRQCYLDFMLNLEVRRIFKTRAKIIT
HIRSFLDSLGFLEVETPMMHIIAGGAAARPFVTHHNELNMRLFMRIAPELYLKQLVVGGF
DRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAYADYNDLMDLTEKMLSGMVKELTGSYIIK
YHAKGLESDPVEIDLTPPFRRIDMVEELEKVANLNIPKDLSSDEANKYLIDACAKFEIEC
PPPQTTARLLDKLVGHFLEETCVNPTFILNHPEIMSPLAKWHRSKPGLTERFELLINKHE
LCSAYTELNDPVVQRQRFADQLKDRHSGDGEAMVLDENFCTALEYGLPPTGGWGLGIDRL
VMLLTDSQNIKEVLLLPTMKPQDEPPSKEDVEKQMSHLKMNEEHI

Transcript Sequence

Gene sequence data has not been registered.